dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02762
Location and strand information: 228969 - 232295 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02763
Location and strand information: 232553 - 236488 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02764
Location and strand information: 236522 - 237217 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02765
Location and strand information: 237362 - 239377 (+)
Family: GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5603
Protein molecular weight: 77422.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02766
Location and strand information: 239524 - 240513 (-)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.3641
Protein molecular weight: 37509.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02767
Location and strand information: 240922 - 242121 (-)
Family: null
Protein type: null
Protein description: Acetate kinase

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02768
Location and strand information: 242161 - 243180 (-)
Family: null
Protein type: null
Protein description: Phosphate acetyltransferase

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02769
Location and strand information: 243377 - 243820 (+)
Family: 1.E.14.1.13
Protein type: TC
Protein description: Holin-like protein CidA

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02770
Location and strand information: 243817 - 244512 (+)
Family: 2.A.122.1.1
Protein type: TC
Protein description: Inner membrane protein YohK

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02771
Location and strand information: 244569 - 245486 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02772
Location and strand information: 245500 - 246516 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02773
Location and strand information: 246608 - 247741 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 5.8547
Protein molecular weight: 43506.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02774
Location and strand information: 247746 - 249041 (-)
Family: GH145|PL42
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4536
Protein molecular weight: 49621.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02775
Location and strand information: 249051 - 250097 (-)
Family: GH43|GH43_24
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.9035
Protein molecular weight: 39547.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02776
Location and strand information: 250314 - 252047 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02777
Location and strand information: 252097 - 254097 (-)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.8021
Protein molecular weight: 76609.28
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02778
Location and strand information: 254304 - 256895 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02779
Location and strand information: 256977 - 259457 (+)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.3642
Protein molecular weight: 95192.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02780
Location and strand information: 260262 - 261122 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02781
Location and strand information: 261331 - 263277 (-)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 6.3777
Protein molecular weight: 73002.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02782
Location and strand information: 263313 - 265778 (-)
Family: GH51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3624
Protein molecular weight: 92237.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02783
Location and strand information: 266099 - 267073 (-)
Family: GH43|GH43_19
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.4643
Protein molecular weight: 36991.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_5|CGC5
Gene ID: MGYG000001378_02784
Location and strand information: 267122 - 269458 (-)
Family: GH35|CBM32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.3601
Protein molecular weight: 88717.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinogalactan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001378_02762	TonB-dependent receptor SusC	TC	228969	232295	-	1.B.14.6.1
MGYG000001378_02763	Sensor histidine kinase RcsC	TF	232553	236488	+	HTH_AraC
MGYG000001378_02764	hypothetical protein	null	236522	237217	-	UPF0758_N\| RadC
MGYG000001378_02765	hypothetical protein	CAZyme	237362	239377	+	GH20
MGYG000001378_02766	hypothetical protein	CAZyme	239524	240513	-	GT2
MGYG000001378_02767	Acetate kinase	null	240922	242121	-	Acetate_kinase
MGYG000001378_02768	Phosphate acetyltransferase	null	242161	243180	-	PTA_PTB
MGYG000001378_02769	Holin-like protein CidA	TC	243377	243820	+	1.E.14.1.13
MGYG000001378_02770	Inner membrane protein YohK	TC	243817	244512	+	2.A.122.1.1
MGYG000001378_02771	hypothetical protein	null	244569	245486	+	LPG_synthase_C
MGYG000001378_02772	hypothetical protein	null	245500	246516	+	Acetyltransf_9
MGYG000001378_02773	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	246608	247741	-	GH105
MGYG000001378_02774	hypothetical protein	CAZyme	247746	249041	-	GH145\| PL42
MGYG000001378_02775	hypothetical protein	CAZyme	249051	250097	-	GH43\| GH43_24
MGYG000001378_02776	hypothetical protein	null	250314	252047	-	BNR_4
MGYG000001378_02777	hypothetical protein	CAZyme	252097	254097	-	GH154
MGYG000001378_02778	HTH-type transcriptional activator RhaR	TF	254304	256895	+	HTH_AraC
MGYG000001378_02779	hypothetical protein	CAZyme	256977	259457	+	GH31
MGYG000001378_02780	hypothetical protein	null	260262	261122	-	TonB_C\| DUF4488
MGYG000001378_02781	Retaining alpha-galactosidase	CAZyme	261331	263277	-	GH97
MGYG000001378_02782	hypothetical protein	CAZyme	263313	265778	-	GH51
MGYG000001378_02783	hypothetical protein	CAZyme	266099	267073	-	GH43\| GH43_19
MGYG000001378_02784	hypothetical protein	CAZyme	267122	269458	-	GH35\| CBM32
Protein ID	Protein Name	Type	Start	End	Strand	Signature